BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027A06LP1|AL428648
(884 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1677 1709 0.0
>3x_Contig1677
Length = 15081
Score = 1709 bits (859), Expect = 0.0
Identities = 877/885 (99%), Gaps = 1/885 (0%)
Strand = Plus / Minus
Query: 1 ggtctagatatgtttagtatgatgmtcgcaagatacgtagagttatagtgttaaataagt 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 10306 ggtctagatatgtttagtatgatgcgggcaagatacgtagagttatagtgttaaataagt 10247
Query: 61 tcccgctatggtggaacgggaggtagaatataggttgtaggagatacgatgcgatatatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10246 tcccgctatggtggaacgggaggtagaatataggttgtaggagatacgatgcgatatatg 10187
Query: 121 taagtatactttctggcaaagcctcaagaatttcatttttttggtggggcaggaaaaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10186 taagtatactttctggcaaagcctcaagaatttcatttttttggtggggcaggaaaaagc 10127
Query: 181 ctgacggtgtcgtatgggtcggaattgactccatagactcttaccgcccttcacgggcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10126 ctgacggtgtcgtatgggtcggaattgactccatagactcttaccgcccttcacgggcac 10067
Query: 241 taccacgatataccgttttctaaagctctgtgtacttttatggaaagaataaacgctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10066 taccacgatataccgttttctaaagctctgtgtacttttatggaaagaataaacgctgtt 10007
Query: 301 gcttggtctggggttgcatgctgaaggcactgaatcccttctctcaaatttaaggaatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10006 gcttggtctggggttgcatgctgaaggcactgaatcccttctctcaaatttaaggaatat 9947
Query: 361 tatctgtcattttactgaataactacaaaacctattatgaacgttcactgtgaatgcgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9946 tatctgtcattttactgaataactacaaaacctattatgaacgttcactgtgaatgcgaa 9887
Query: 421 tgcatagtatacgatacgttgtatcgggagatacccataaggcaacttaacagagccaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9886 tgcatagtatacgatacgttgtatcgggagatacccataaggcaacttaacagagccaaa 9827
Query: 481 ctcggatggaaactaatatatacttgccggggggaggaaagggaaaaaaggtggacgaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9826 ctcggatggaaactaatatatacttgccggggggaggaaagggaaaaaaggtggacgaca 9767
Query: 541 atgtctccaaacactagaataggaagaaagcaaaaacgaagtagtagtagtaattgtagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9766 atgtctccaaacactagaataggaagaaagcaaaaacgaagtagtagtagtaattgtagt 9707
Query: 601 tcacgtgacatcaccaaggtgatggttcaagtgatcttgtattcgaatgtatcgatgatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9706 tcacgtgacatcaccaaggtgatggttcaagtgatcttgtattcgaatgtatcgatgatg 9647
Query: 661 ttttggtcatggtagatcgttagcgtgtctcttgtggaagagacgttgaaggcatggacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9646 ttttggtcatggtagatcgttagcgtgtctcttgtggaagagacgttgaaggcatggacc 9587
Query: 721 ttgttgatgtg-aactgcgatctaatatccycgaatccmcagcagatccattgttgctct 779
||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 9586 ttgttgatgtgaaactgcgatctaatatcctcgaatccacagcagatccattgttgctct 9527
Query: 780 tcattgttgtgcycgaacgccttgagcatggtaccgtacaagtgtgtagatagcaggaac 839
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9526 tcattgttgtgctcgaacgccttgagcatggtaccgtacaagtgtgtagatagcaggaac 9467
Query: 840 aacgtacggcagctgctaccccmagatatgagttggtttggattc 884
|||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 9466 aacgtacggcagctgctaccccaagatatgagttggtttggattc 9422
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5263
Number of Sequences: 1807
Number of extensions: 5263
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 884
length of database: 10,358,551
effective HSP length: 16
effective length of query: 868
effective length of database: 10,329,639
effective search space: 8966126652
effective search space used: 8966126652
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)